The corona virus epidemics – a new phase

Up till now, the government has had a strategy to knock down the corona virus. The spread of the infection is now under control, and yesterday the government announced that they are now switching to a control strategy. The goal is still the same as before, that our health service should have the capacity to help everyone who needs it, those with coronary illness and those with other illnesses. This means that businesses and activities must still take infection control measures when they open up.

In recent weeks, K2 has opened something up – from only allowing exceptions for critical functions to exceptions essential for those completing a degree in 2020 or to generate preliminary data for research applications or particularly costly or critical experiments. At the time of writing, we do not know how much of our activity K2 can open in the next few weeks. The government proposes that distance education should continue to be the norm after May 11, and those in need of collective travel to work should still have a home office. Presently, we do not know whether there will be new reliefs for the laboratories. When we have received new guidance from the Faculty, we will announce the new guidelines through the research group leaders.

Of course, there is great eagerness to get back to normal life at K2. I’m very happy about that. But it is important to remember that the ongoing opening up can give the impression that the outbreak of the virus is about to go over. Unfortunately, it is not. As we gradually reduce the restrictions, it requires that we still keep control of the infection. At K2, we must continue with the simple measures that we know is working and have few negative consequences: be careful about hand washing and cough hygiene, keep at least one meter distance, and stay home when you are sick.

Enjoy the (hopefully corona-free) weekend!

 

Working environment survey: How are you?

Dear Colleague,

Working from home can be challenging and we wonder how you are doing. We have therefore prepared a simple survey to get some insight into ​​how you feel and what your work situation is like. The survey is anonymous and therefore we will not be able to have any individual follow-up based on the information in the form. If you need follow-up, I urge you to contact your nearest manager, safety representative or corporate health service.

Thank you for taking the time to give your input. Deadline 14th May.

English form: https://skjemaker.app.uib.no/view.php?id=8414760

CCBIO courses as online events: CCBIO904 Biomarkers and Tumor Biology in Clinical Practice May 25-27, and CCBIO908 Scientific Writing June 8-11

Dear all

We are happy to announce that the two courses formerly postponed due to the corona measures, now will take place as web-based courses which you can attend from your home office:

  • CCBIO904 Biomarkers and Tumor Biology in Clinical Practice: May 25-27, 2020 (full days)
  • CCBIO908 Scientific Writing & Communication Seminar, June 8-11, 2020 (4 half days)

Continue reading

Norwegian: Utlysning av forskningsmidler fra Gades Legat

Gades Legat lyser ut midler til anvendelse i forskning innen patologi, mikrobiologi og immunologi. Alle som er faglig tilknyttet forskningsmiljø ved UiB eller Haukeland Universitetssykehus innen patologi, immunologi eller mikrobiologi kan søke om midler. Søknad skal være kortfattet og inneholde:

  • Navn på søker og arbeidssted
  • Navn og kort beskrivelse av prosjektet det søkes om midler til
  • Budsjett
  • Søknad skal totalt ikke overskride 2 sider

Legatet har i senere år tildelt beløp i størrelsesorden 20-100 000 kr, men større tildelinger kan vurderes. Støtte til reiser der man ikke formidler/presenterer egen forskning vil ikke bli prioritert.

Søknadsfrist er torsdag 20. august 2020

Søknad sendes som én PDF-fil til Gades Legat ved sekretær Håvard Hoel Aass, Havard.Aass@uib.no

Norwegian: Invitasjon til nye skisser for tverrfaglege marine stipendiatstillingar 2020 – forlenget frist

Universitetet i Bergen (UiB) skal også i år lyse ut to stipendiatstillingar som eit ledd i UiB sin marine satsing. Vi ynskjer innspel frå fagmiljøa til mogelege fagområda for stillingane. Stillingane skal ikkje vere knytt til MatNat.-fakultetet, men MatNat. kan inngå i tverrfakultært samarbeid. Vi vil gjerne oppfordre til samarbeidsprosjekt der fagmiljø ved to fakultet går saman om forslaget. For meir informasjon, sjå: MaringUtvalg – Phd-utlysninger 2020 – ny frist

The Olav Thon Foundation – support for Nordic research projects in medicine 2021

The Olav Thon Foundation will allocate NOK 20 million for grants to Nordic research collaboration in the field of medicine for 2021. Applications will be assessed in light of their academic quality and the projects’ potential for development of new and groundbreaking knowledge in medicine. For 2021, the Board of the Foundation has decided to invite applications for research on reparative medicine targeting diseases in the musculoskeletal and peripheral and central nervous system.

Projects should be based on the use of stem cell biology, genetic approaches, tissue engineering, biotechnology, or regenerative medicine with the aim of repairing, regrowing or replacing damaged or diseased cells or tissues.

Research support for each project is restricted to a maximum of NOK 2.5 million per year for a maximum of four years.

You can find the announcement here.

This week`s employee – Ane Aamli Gagnat

What are you working on?

I have been a PhD student in the Respiratory research group at K2 since September 2019. Before that I was a MSRP (Forskerlinje) student and had the opportunity to do research while studying medicine. In my work I am examining the risk of lung cancer in patients suffering from COPD (Chronic Obstructive Pulmonary Disease). I have been using data from GenKOLS, which was collected here in Bergen in 2003-2005. I have linked these data to cancer data from the Cancer Registry of Norway. In addition, I help collecting data for a multicentre study, BOLD (Burden of Global Lung Disease)

Why K2? What do you enjoy working with at K2?

I like being able to work with existing data, while contributing to collect more. It is not very social to work on the computer all the time, so I enjoy meeting both study participants and co-workers. I have also had the chance to teach a little, which is fun. The Respiratory research group often attends pleasant and educational congresses in Norway and abroad.

New publications

Here are recent publications with contributions from K2 based on last week’s search on PubMed (and optionally articles that have not been included in previous lists). This time the list includes in total 8 recent publications. The entries appear in the order they were received from NCBI. If you have publications that are not included in this or previous lists, please send the references to Oda Barth Vedøy.

Continue reading

Dear all!

Now it has been nearly 7 weeks since UiB was closed due to the SARS-CoV-2 pandemic. Most of us are still obliged to use home-office. Since Monday 27/4, some more people have been allowed back in the labs. However, it is still an exception that you get access!

Remember that it is the research group leader who has to send a list of who should have access to me (including risk assessment and confirmation of passed infection control course), and then Pål as head of department decides who gets access. And then of course, there are the infection control and hygiene rules when you are at work, so it takes some organization to avoid too many people at the same time in smaller rooms. A big thank you to all those who help make it work in these times!

I would also like to remind PhD fellows who have been delayed in their progress because of home-office during the Corona period to make a written description of the delay and let the supervisor confirm this. The documentation has to be sent to the faculty administration by e-mail:  hrmed@uib.no, mark with Korona in the subject line. This documentation will be entered into the personnel folder of the individual and may form the basis for an extension of the appointment period if necessary.

Finally, I wish you all a nice International Worker’s day and a good weekend!

The Nordic Nanopore-Seq Network Meeting September 14.

The Valen Lab at the Computational Biology Unit Bergen is hosting a conference to get to know Oxford Nanopore Sequencing and its applications.
The free-of-charge, one-day meeting aims at bringing together Nanopore experts with interested scientists from various disciplines. Experts from the company as well as experienced scientists will cover a wide range of scientific areas.
Additionally this conference aims at founding a network of Nanopore Sequencing users in the Nordics.

If you are interested, find out more information at the conference website: https://nordicnanopore.net/n3m-2020/

Continue reading

Norwegian: Ønsker du pedagogisk stimuli?

Læringsfestivalen er i år digital, og gratis å være med på, den går 4-5 mai.

Hva er Læringsfestivalen? Festivalen er en nasjonal konferanse med fokus på undervisning og læring i høyere utdanning. Årets tema er:

  • studentaktiv læring
  • læringsarenaer
  • vurdering
  • læring og teknologi

Programmet er tilgjengelig her: https://www.ntnu.no/laeringsfestivalen/program

PhD defense – Yaping Hua

Yaping Hua will defend her PhD thesis on Monday 4th May 2020

Trial lecture: Monday 4th May 2020 at 10.15.
Topic: “Traditional Chinese Medicine (TCM) in treatment of cancer – clinical effects on tumor size, survival, and metastasis”
Place: https://tinyurl.com/YapningHua 

Public defense: Monday 4th May 2020 at 12.15.
Title of dissertation: «Discovery and characterization of novel STAT3 and  androgen receptor inhibitors in prostate cancer cells”                                                                                                            Place: https://tinyurl.com/YapningHua

1st opponent: Professor José Carlos Machado, University of Porto, Portugal
2nd opponent: Førsteamanuensis Gerd Berge, UiT The Arctic University of Norway 3rd member of the comittee: Professor Lars Herfindal

The defense will be led by professor Silke Appel

This week’s employee – Lars Herfindal

Can you tell us something about your daily tasks and work in general?

I have been appointed here as a professor of pharmacology for almost five years. Prior to that, I was a member of the group of Stein Ove Døskeland, where I also earned a Doctorate in Cell Biology. My work is twofold, teaching and researching. I have responsibility of teaching pharmacology for pharmacists. It is a challenging field, consisting of several disciplines, such as physiology, pathophysiology, cell biology, biochemistry, drug chemistry, to mention some. Luckily, I have skilled co-workers who help me pull the load. Our goal is to constantly prepare for teaching, so that pharmacists have a good basis for practical use of pharmacology when going to work.

Research takes time, and is a way of life and a hobby (pleasure-staking activity that you do in your spare time) as much as work. During the time here I have built up the research activity around the development of new therapies for cancer, focusing on new molecules, and nanomedicine. We have also looked up systems where we use zebrafish larvae to find both the toxicity and effectiveness of new molecule sandand. With me in the research I have a small group of PhD students, master-student  and researchers , who take care of most of the practical work. It’s a good time when it’s needed, but most of the time is enough in the office.
I’m so lucky to be part of several collaborative project working on drug development. It is very inspiring to meet skilled researchers in other disciplines, who can fill in my knowledge hole.

What do you like working at K2?

I applied to K2 because I saw that it was a varied research environment, and expertise that allowed me to develop as a researcher. Although it is in many ways similar to the Department of Biomedicine, where I came from, the close-up of the clinic is a huge advantage at K2. I’ve had the opportunity to work with clinicians, who make sure that my research abruptly come much more closer to the patient. There are also a lot of people at K2, and a lot of people who helped me get started right after I started here. Without that help, it would be much harder for me to get started with my research. I would also add that teaching is actually quite nice, so long as they get enough time to prepare. All in all, K2 is a nice place to work.

Home office – Anja Torsvik

I can confirm that the efficiency is drastically reduced when working in an open office landscape, especially if you share this with a 6-year-old, a snoring dog, and the regular visit of teenagers. In contrast, the working day has been extended by several work sessions, e.g. “The pre-breakfast session” and the “while-dinner-is-cooking-session”. I am approaching the end of my postdoc period and my work assignments now is to write manuscripts and analyze data. Table and figure editing can be partially combined with homeschool teaching, while work that requires deeper concentration is dependent on good “noise cancelling”.

I have had some problem with unstable VPN but setting files and software in offline mode has mainly solved this issue.

Digital meetings work well, and it is motivating to have someone to talk work-related stuff with. I miss my colleagues at MGM and K2, but lunch break zoom with the Martens group has been a nice option.

I enjoy working in the home office, but unfortunately it is not ergonomically designed as a workplace. However, I can vary between different workplaces / chairs / couch, and I have access to a good coffee machine and a good selection of lunch dishes. The view of Løvstakken is great, especially when the sun is shining. Significantly much better than the dark view of the rock wall from the 2nd floor of the Lab building.

New publications

Here are recent publications with contributions from K2 based on last week’s search on PubMed (and optionally articles that have not been included in previous lists). This time the list includes in total 7 recent publications. The entries appear in the order they were received from NCBI. If you have publications that are not included in this or previous lists, please send the references to Oda Barth Vedøy.

Continue reading

Mette Vesterhus new leader of teaching at K2

Jone Trovik has been the leader of teaching at K2 since 2015. She took on this important responsibility in connection with the implementation of the new curriculum. Jone has done this in a very satisfactory way. Surely there was no downside to her being an active gynecologist! In addition, she has contributed constructive input to the many issues we are working on at K2. In particular, I want to highlight her good mood and contagious laughter. It’s never boring when Jone is there. Thank you so much, Jone!

Everything has to come to an end, and after 4 ½ as leader of teaching, it was natural with a change. The new leader of teaching is Mette Vesterhus. She is a 50/50 associate professor / consultant physician (gastroenterology) at Haraldsplass Diakonale Sykehus. She has had a research stay at Harvard and has her research interests in diseases of the liver and biliary tract. Vesterhus has been interested in teaching since the days of her studies. She has been a student representative both to the Student Parliament at UiB and to the National Student Organization. Since 2018, she has been the subject manager for the propedeutics teaching for medical students at Haraldsplass.

Welcome Mette as leader of teaching at K2!

Norwegian: Egne rom for bruk av Zoom og Kaltura i Sentralblokken – Mulighet for gjestekonto ved UiB

Hei alle som underviser ved K1 og K2!

Vi merker oss at de to rommene i sentralblokken hvor det er tilrettelagt for digital undervisning, ikke er mye brukt. Dette tilbudet var veldig etterspurt for en tid tilbake.

Hvis det er fordi de andre løsningene for å undervise fungerer bedre enn tidligere, så er det supert. Men om det skyldes manglende kjennskap til tilbudet, så vil jeg gjøre noe med det nå.

Under finner du informasjon om følgende:

– Info om egne rom for digital undervisning

– Mulighet for å søke gjestekonto ved UiB (nyttig å videresende til sykehusansatte som underviser)

Continue reading

Conference: Oxford Nanopore Sequencing and its applications.

The Valen Lab at the Computational Biology Unit Bergen is hosting a conference to get to know Oxford Nanopore Sequencing and its applications in Bergen on 14.09.2020.

The free-of-charge, one-day meeting aims at bringing together Nanopore experts with interested scientists from various disciplines. Experts from the company as well as experienced scientists will cover a wide range of scientific areas.

Additionally this conference aims at founding a network of Nanopore Sequencing users in the Nordics.

If you are interested, find out more information at the conference website: https://nordicnanopore.net/n3m-2020/

Continue reading

New publications

Here are recent publications with contributions from K2 based on last week’s search on PubMed (and optionally articles that have not been included in previous lists). This time the list includes in total 8 recent publications. The entries appear in the order they were received from NCBI. If you have publications that are not included in this or previous lists, please send the references to Oda Barth Vedøy.

Continue reading