Author Archives: ove072

The Nordic Nanopore-Seq Network Meeting September 14.

The Valen Lab at the Computational Biology Unit Bergen is hosting a conference to get to know Oxford Nanopore Sequencing and its applications.
The free-of-charge, one-day meeting aims at bringing together Nanopore experts with interested scientists from various disciplines. Experts from the company as well as experienced scientists will cover a wide range of scientific areas.
Additionally this conference aims at founding a network of Nanopore Sequencing users in the Nordics.

If you are interested, find out more information at the conference website: https://nordicnanopore.net/n3m-2020/

Continue reading

Norwegian: Ønsker du pedagogisk stimuli?

Læringsfestivalen er i år digital, og gratis å være med på, den går 4-5 mai.

Hva er Læringsfestivalen? Festivalen er en nasjonal konferanse med fokus på undervisning og læring i høyere utdanning. Årets tema er:

  • studentaktiv læring
  • læringsarenaer
  • vurdering
  • læring og teknologi

Programmet er tilgjengelig her: https://www.ntnu.no/laeringsfestivalen/program

PhD defense – Yaping Hua

Yaping Hua will defend her PhD thesis on Monday 4th May 2020

Trial lecture: Monday 4th May 2020 at 10.15.
Topic: “Traditional Chinese Medicine (TCM) in treatment of cancer – clinical effects on tumor size, survival, and metastasis”
Place: https://tinyurl.com/YapningHua 

Public defense: Monday 4th May 2020 at 12.15.
Title of dissertation: «Discovery and characterization of novel STAT3 and  androgen receptor inhibitors in prostate cancer cells”                                                                                                            Place: https://tinyurl.com/YapningHua

1st opponent: Professor José Carlos Machado, University of Porto, Portugal
2nd opponent: Førsteamanuensis Gerd Berge, UiT The Arctic University of Norway 3rd member of the comittee: Professor Lars Herfindal

The defense will be led by professor Silke Appel

New publications

Here are recent publications with contributions from K2 based on last week’s search on PubMed (and optionally articles that have not been included in previous lists). This time the list includes in total 7 recent publications. The entries appear in the order they were received from NCBI. If you have publications that are not included in this or previous lists, please send the references to Oda Barth Vedøy.

Continue reading

Mette Vesterhus new leader of teaching at K2

Jone Trovik has been the leader of teaching at K2 since 2015. She took on this important responsibility in connection with the implementation of the new curriculum. Jone has done this in a very satisfactory way. Surely there was no downside to her being an active gynecologist! In addition, she has contributed constructive input to the many issues we are working on at K2. In particular, I want to highlight her good mood and contagious laughter. It’s never boring when Jone is there. Thank you so much, Jone!

Everything has to come to an end, and after 4 ½ as leader of teaching, it was natural with a change. The new leader of teaching is Mette Vesterhus. She is a 50/50 associate professor / consultant physician (gastroenterology) at Haraldsplass Diakonale Sykehus. She has had a research stay at Harvard and has her research interests in diseases of the liver and biliary tract. Vesterhus has been interested in teaching since the days of her studies. She has been a student representative both to the Student Parliament at UiB and to the National Student Organization. Since 2018, she has been the subject manager for the propedeutics teaching for medical students at Haraldsplass.

Welcome Mette as leader of teaching at K2!

Norwegian: Egne rom for bruk av Zoom og Kaltura i Sentralblokken – Mulighet for gjestekonto ved UiB

Hei alle som underviser ved K1 og K2!

Vi merker oss at de to rommene i sentralblokken hvor det er tilrettelagt for digital undervisning, ikke er mye brukt. Dette tilbudet var veldig etterspurt for en tid tilbake.

Hvis det er fordi de andre løsningene for å undervise fungerer bedre enn tidligere, så er det supert. Men om det skyldes manglende kjennskap til tilbudet, så vil jeg gjøre noe med det nå.

Under finner du informasjon om følgende:

– Info om egne rom for digital undervisning

– Mulighet for å søke gjestekonto ved UiB (nyttig å videresende til sykehusansatte som underviser)

Continue reading

Conference: Oxford Nanopore Sequencing and its applications.

The Valen Lab at the Computational Biology Unit Bergen is hosting a conference to get to know Oxford Nanopore Sequencing and its applications in Bergen on 14.09.2020.

The free-of-charge, one-day meeting aims at bringing together Nanopore experts with interested scientists from various disciplines. Experts from the company as well as experienced scientists will cover a wide range of scientific areas.

Additionally this conference aims at founding a network of Nanopore Sequencing users in the Nordics.

If you are interested, find out more information at the conference website: https://nordicnanopore.net/n3m-2020/

Continue reading

New publications

Here are recent publications with contributions from K2 based on last week’s search on PubMed (and optionally articles that have not been included in previous lists). This time the list includes in total 8 recent publications. The entries appear in the order they were received from NCBI. If you have publications that are not included in this or previous lists, please send the references to Oda Barth Vedøy.

Continue reading

Teaching challenges

Dear all K2 employees; THANK YOU for your invaluable efforts in teaching at our department!

Each of you contribute direct or indirect to the teaching provided. As with all other work, the corona epidemic also had a significant impact on how we could conduct educational activities. Under these circumstances, all staff have shown a great deal of flexibility: despite physically closed campus, our students have been nurtured and provided education, but using other modalities and through other channels.

Lectures have been moved from auditoriums to the web, been recorded through Kaltura or sound tracks on PowerPoint files and posted at MittUiB, group sessions or lectures are held via Zoom or Skype. And even though the hospital closed down a great deal of patient care, students who needed practice to obtain a temporary license have completed and been approved the revised minimum service. This provide Norway more people who can function as doctors from summer and onwards (leaving us better equipped for a possible new corona wave).

Thanks also to the hospitals in our region (Haukeland, Haraldsplass, Stavanger, Førde and Haugesund) that have helped students to actually complete their practice. We have been far more fortunate than in Oslo, where hospital closed the doors for students in clinical practice.

The faculty has established a group of super-users in digital teaching, Bergithe Eikeland Oftedal is K2’s representative. She shall not act as IT technician or conduct individual training but can advise on what programs/equipment and what is appropriate to use.

Finally: Thanks and goodbye from me! I have been acting as teaching director for K2 since I was hired as professor in the fall of 2015, ie. I started at the same time as the “new” curriculum for medicine. It has been exciting to follow the implementation (both of the curriculum and my professional academic function), participate in the inner life of the department management and to truly ensure that teaching is as high on the agenda as it deserves! I am not quitting teaching but I am transferring the formal responsibility as leader of teaching  to my successor Mette Vesterhus. Welcome Mette, you will receive proper presentation in a later K2-news.

Norwegian: Smittevernråd til virksomhetskritisk personell

Bedriftshelsetjenesten har utarbeidet råd om smittevern for virksomhetskritisk personell som befinner seg på campus i en periode med økt fare for korona-smitte: Allmenne smittevernsråd til virksomhetskritisk personell ved UiB. Vi ber om at alle setter seg inn i, og følger disse. Ledelsen ved alle enheter skal legge til rette for gode rutiner for å begrense ytterligere smittespredning så mye som mulig.

Norwegian: Digitalt frokostmøte om arbeidsmiljø 14. mai

Arbeidsmiljø – trakassering – håndtering

Et godt arbeidsmiljø kjennetegnes av god ledelse, medvirkning fra ansatte og tydelige organisatoriske rammer. Kompetanse, god kommunikasjon, mestring og anerkjennelse gir både trygghet og trivsel. Noen ganger er det imidlertid ikke slik og det oppstår situasjoner på arbeidsplassen om fører til mobbing og trakassering.

Vernetjenesten ved UiB ønsker å sette fokus på betydningen av godt arbeidsmiljø gjennom frokostseminarserien Arbeidsliv i endring – hva med arbeidsmiljøet. Serien setter søkelys på arbeidslivs- og arbeidsmiljøfaktorer under endring og omstilling. Hvordan tar vi vare på arbeidsmiljøet vårt og hverandre i en verden som stadig er i endring? Hvordan ha fokus på arbeidsmiljø med stadig nye krav til effektivitet, kompetansebygging, fleksibilitet, bærekraft og nye digitale løsninger i arbeidslivet? Målgruppen er alle ansatte og ledere.

Continue reading

Peder Sather Grant Program

The deadline for the Peder Sather program has been extended till 1 May. This is a nice opportunity for researchers who have collaborators at UC Berkeley or would like to establish collaborators with that US institution.

The Center offers grants of between $10K and $25K. Funds are made available for two academic years.  Grants can support activities such as workshops, mini-conferences, virtual intellectual exchanges, the undertaking of exploratory and pilot studies, activities such as PhD student exchanges, longer-term stays for Principal Investigators, the collection and analysis of data, and other core research activities.

You can find more info about the program here, and do not hesitate to contact K2’s research advisor if you want more info: amra.grudic@uib.no

New publications

Here are recent publications with contributions from K2 based on last week’s search on PubMed (and optionally articles that have not been included in previous lists). This time the list includes in total 14 recent publications. The entries appear in the order they were received from NCBI. If you have publications that are not included in this or previous lists, please send the references to Oda Barth Vedøy.

Continue reading

Happy Easter holidays!

Now that the Easter holidays are here again, we can look forward to even brighter days, warmer sun, and some long-awaited holidays. I hope you can enjoy some well-deserved days off with family, friends, outdoor activities, and rest.

The coronavirus epidemic has halted most of the experimental research and turned upside down teaching and meeting activities. It has been a tough and brutal exercise, but I think we have also learned a lot that we will take with us after the epidemic is over. I want to take this opportunity to thank you for your constructive attitude and effort in meeting the enormous challenges we have had since March 12 at 6 pm. I am really proud of the K2.

On April 8, the government will announce possible changes in restrictions on schools and universities. The university now operates with 6 phases where phase 0 is where we are now and phase 5 is regular activity. If there will be any ease of restrictions for the universities, UiB wants this to happen gradually and slowly. We have mapped research and teaching activities that may fit with what the university calls phases 1 and 2, which seem most realistic in the first place. The research groups have been given the challenge of suggesting a limited number of projects. I have reviewed these, and based on central guidelines, selected those that seem most critical to get started and gain acceptance for. An application has been sent to the faculty for exemptions from the current limitations for these projects. Unfortunately, the deadline for this review was extremely short, and I thank the research team leaders and researchers for responding so quickly and constructively.

For many Norwegians, Easter means spending the holidays skiing in the mountains, boating, or travelling abroad. This will be different this year with a ban on travel and spending the night in the cabin in municipalities other than one´s place of residence and advice on reduced activity at sea. Prime Minister Erna Solberg says it is not a terribly great sacrifice to stay home, and although Norwegians are concerned about their own freedom and independence, this is the time to show unity. I really agree with her. Take the short trips instead of the long ones right now. Emergency preparedness in the mountain areas should be used for those who live there. Keep your distance – by exposing ourselves to infection, we can infect others who cannot tolerate it – here we must all take responsibility for our community at large. Also keep in mind those who are alone for various reasons. The holiday itself can be a difficult time for them, and the coronavirus epidemic can add a new kind of loneliness to being alone. Make a phone call, meet on the streets only at a distance, arrange Skype / Zoom / Facetime meetings with chat, contests and more. Only the imagination sets the limits, we have all seen the video clips that go viral at the moment.

Wishing a happy Easter holiday to all of you. Take care of yourself, your loved ones, and also those who are not the closest!

Pål

Regarding joint Team for Department of Clinical Science – created, but not yet in use

The management board at K2 was informed that this channel is created automatically by the IT department at the start of the corona eruption. We discussed whether this channel should be used for information flow. If Teams is to be introduced to the department, it should as far as possible replace all shared emails to the department. Due to the corona situation, we need frequent information for all our employees and we were uncertain how many employees currently use Team at a regular basis. Considering this, we decided to await the introduction of Teams. The management team will have another discussion of implementing Teams for all and usage after Easter.

Norwegian: COST: Nye forskernettverk – medisinsk og helsefaglig forskning

COST er en europeisk nettverksorganisasjon der de fleste landene i Europa (herunder Norge og alle EU-landene) er medlemmer. En viktig oppgave for COST er å fremme europeisk forskningssamarbeid ved å igangsette vitenskapelige nettverk (“COST-aksjoner”). Nærmere informasjon om COST kan finnes på deres nettside http://www.cost.eu/ .

I mars 2020 ble det vedtatt å igangsette 45 nye COST-aksjoner, hvorav følgende er innenfor/relevante for medisinsk og helsefaglig forskning:

Continue reading

New publications

Here are recent publications with contributions from K2 based on last week’s search on PubMed (and optionally articles that have not been included in previous lists). This time the list includes in total 7 recent publications. The entries appear in the order they were received from NCBI. If you have publications that are not included in this or previous lists, please send the references to Oda Barth Vedøy.

Continue reading